diff --git a/change_abilities.py b/change_abilities.py
index f5e9514..f1df64d 100644
--- a/change_abilities.py
+++ b/change_abilities.py
@@ -27,14 +27,16 @@ def get_target_abilities(ability_data_path):
     with open(ability_data_path, "r", encoding="utf-8") as f:
         lines = f.readlines()
         for line in lines:
-            line = (line.strip()).split() # Removing new line characters, as well as leading and trailing spaces. Then split it by the middle space
-            species_name = line[0][:-6].lower() # Removes the "-Mega" suffix and sends the name to lower case
+            line = (line.strip()).split(":") # Removing new line characters, as well as leading and trailing spaces. Then split it by the middle colon
+
+            species_name = line[0].split("-")[0].lower() # Removes the "-Mega" suffix and sends the name to lower case
+
             ability = (line[1].replace(" ", "")).lower() # Removes the spaces 
             ability_data[species_name] = ability
 
     return ability_data
 
-def write_augmented_species_data(src_dir, dst_dir, species_data):
+def write_augmented_species_data(species_additions_dir, dst_dir, ability_data):
     '''
     Takes the new species data in dictionary form and creates the new data
     '''
@@ -42,7 +44,9 @@ def write_augmented_species_data(src_dir, dst_dir, species_data):
     gen_dirs = os.listdir(species_additions_dir) # Get a list of all directories in the data path, each corresponding to one generation
     for gen_dir in gen_dirs:
 
-        dir_path = os.path.join(data_path, gen_dir)
+        dst_gen_dir_path = os.path.join(dst_dir, gen_dir)
+        os.makedirs(dst_gen_dir_path, exist_ok=True) # Make the new output dir for later
+        dir_path = os.path.join(species_additions_dir, gen_dir)
 
         if os.path.isdir(dir_path) == False: # Make sure it's actually a real file path
             return 1
@@ -52,16 +56,47 @@ def write_augmented_species_data(src_dir, dst_dir, species_data):
         for species_file_name in species_files:
 
             species_file_path = os.path.join(dir_path, species_file_name)
+
+            species_data = None
             with open(species_file_path, "r", encoding="utf-8") as f:
                 species_data = json.load(f)
 
+                species_name = species_data["target"] 
+                species_name = species_name.split(":")[1] # The species target name in the file is in the format: "cobblemon:species_name", so we split it by the colon and take the second half
+
                 # Edit the ability data (abities is a list of strings, sometimes having an "h:" in front of the name if it's the hidden ability)
                 forms = species_data["forms"]
                 for form in forms:
-                    abilities = form["abilities"]
 
+                    if species_name not in ability_data:
+                        print(f"WARNING: Species {species_name} not found in ability list. Skipping...")
+                        continue
+
+                    new_ability_name = ability_data[species_name]
+
+                    if "abilities" not in form:
+                        print(f"WARNING: Species {species_name} has no abilities list. Skipping...")
+                        continue
+
+                    abilities = form["abilities"]
+                    new_abilities = []
                     for ability in abilities:
                         
+                        if ":" in ability:
+                            ability_prefix, ability = ability.split(":")    
+                            new_abilities.append(ability_prefix + ':' + new_ability_name)                        
+                        else:
+                            new_abilities.append(new_ability_name)
+
+                    form["abilities"] = new_abilities
+
+            output_file_path = os.path.join(dst_gen_dir_path, species_file_name)
+            with open(output_file_path, "w", encoding="utf-8") as f:
+                json.dump(species_data, f, indent=4)
+
+    return
+
+
 
 def main():
     program_name = sys.argv[0]
@@ -80,4 +115,7 @@ def main():
 
 
 if __name__ == "__main__":
-    main()
\ No newline at end of file
+    main()
+
+# My args:
+# /home/dawson/Desktop/Navas-Investigation/zamega-fabric-1.4.6/data/zamegas/species_additions/ /home/dawson/Desktop/Navas-Investigation/output/ /home/dawson/Desktop/Navas-Investigation/ZAOUMegaList.txt
\ No newline at end of file